Merge branch 'devel' into mpi

.readthedocs.yaml

@@ -5,6 +5,14 @@
 # Required
 version: 2
 
+build:
+  os: ubuntu-22.04
+  tools:
+    python: "mambaforge-22.9"
+  jobs:
+    post_create_environment:
+      - python -m pip install sphinx_rtd_theme
+
 conda:
   environment: conda_env.yml
 
@@ -17,5 +25,4 @@ python:
 sphinx:
    configuration: docs/source/conf.py
 
-formats:
+
-  - pdf

CODE_OF_CONDUCT.md

@@ -0,0 +1,126 @@
+# Contributor Covenant Code of Conduct
+
+## Our Pledge
+
+We as members, contributors, and leaders pledge to make participation in our
+community a harassment-free experience for everyone, regardless of age, body
+size, visible or invisible disability, ethnicity, sex characteristics, gender
+identity and expression, level of experience, education, socio-economic status,
+nationality, personal appearance, race, caste, color, religion, or sexual
+identity and orientation.
+
+We pledge to act and interact in ways that contribute to an open, welcoming,
+diverse, inclusive, and healthy community.
+
+## Our Standards
+
+Examples of behavior that contributes to a positive environment for our
+community include:
+
+* Demonstrating empathy and kindness toward other people
+* Being respectful of differing opinions, viewpoints, and experiences
+* Giving and gracefully accepting constructive feedback
+* Accepting responsibility and apologizing to those affected by our mistakes,
+  and learning from the experience
+* Focusing on what is best not just for us as individuals, but for the overall
+  community
+
+Examples of unacceptable behavior include:
+
+* The use of sexualized language or imagery, and sexual attention or advances of
+  any kind
+* Trolling, insulting or derogatory comments, and personal or political attacks
+* Public or private harassment
+* Publishing others' private information, such as a physical or email address,
+  without their explicit permission
+* Other conduct which could reasonably be considered inappropriate in a
+  professional setting
+
+## Enforcement Responsibilities
+
+Community leaders are responsible for clarifying and enforcing our standards of
+acceptable behavior and will take appropriate and fair corrective action in
+response to any behavior that they deem inappropriate, threatening, offensive,
+or harmful.
+
+Community leaders have the right and responsibility to remove, edit, or reject
+comments, commits, code, wiki edits, issues, and other contributions that are
+not aligned to this Code of Conduct, and will communicate reasons for moderation
+decisions when appropriate.
+
+## Scope
+
+This Code of Conduct applies within all community spaces, and also applies when
+an individual is officially representing the community in public spaces.
+Examples of representing our community include using an official e-mail address,
+posting via an official social media account, or acting as an appointed
+representative at an online or offline event.
+
+## Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be
+reported to the community leaders responsible for enforcement at
+codeofconduct@globalsecuritydatabase.org.
+All complaints will be reviewed and investigated promptly and fairly.
+
+All community leaders are obligated to respect the privacy and security of the
+reporter of any incident.
+
+## Enforcement Guidelines
+
+Community leaders will follow these Community Impact Guidelines in determining
+the consequences for any action they deem in violation of this Code of Conduct:
+
+### 1. Correction
+
+**Community Impact**: Use of inappropriate language or other behavior deemed
+unprofessional or unwelcome in the community.
+
+**Consequence**: A private, written warning from community leaders, providing
+clarity around the nature of the violation and an explanation of why the
+behavior was inappropriate. A public apology may be requested.
+
+### 2. Warning
+
+**Community Impact**: A violation through a single incident or series of
+actions.
+
+**Consequence**: A warning with consequences for continued behavior. No
+interaction with the people involved, including unsolicited interaction with
+those enforcing the Code of Conduct, for a specified period of time. This
+includes avoiding interactions in community spaces as well as external channels
+like social media. Violating these terms may lead to a temporary or permanent
+ban.
+
+### 3. Temporary Ban
+
+**Community Impact**: A serious violation of community standards, including
+sustained inappropriate behavior.
+
+**Consequence**: A temporary ban from any sort of interaction or public
+communication with the community for a specified period of time. No public or
+private interaction with the people involved, including unsolicited interaction
+with those enforcing the Code of Conduct, is allowed during this period.
+Violating these terms may lead to a permanent ban.
+
+### 4. Permanent Ban
+
+**Community Impact**: Demonstrating a pattern of violation of community
+standards, including sustained inappropriate behavior, harassment of an
+individual, or aggression toward or disparagement of classes of individuals.
+
+**Consequence**: A permanent ban from any sort of public interaction within the
+community.
+
+## Attribution
+
+This Code of Conduct is adapted from the [Contributor Covenant][homepage],
+version 2.1, available at
+[https://www.contributor-covenant.org/version/2/1/code_of_conduct.html][v2.1].
+
+Community Impact Guidelines were inspired by
+[Mozilla's code of conduct enforcement ladder][Mozilla CoC].
+
+For answers to common questions about this code of conduct, see the FAQ at
+[https://www.contributor-covenant.org/faq][FAQ]. Translations are available at
+[https://www.contributor-covenant.org/translations][translations].

CREDITS

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This is the official list of entities and people who have contributed to gprMax

gprMax/cmds_geometry/add_grass.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/add_surface_roughness.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/add_surface_water.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/box.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/build_templates.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/cmds_geometry.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/cone.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/cylinder.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/cylindrical_sector.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/edge.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/ellipsoid.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/fractal_box.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/geometry_objects_read.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/plate.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/sphere.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_geometry/triangle.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_multiuse.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cmds_singleuse.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/config.pxd

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/config.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/contexts.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_fields_updates.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_pml_updates_electric_HORIPML.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_pml_updates_electric_MRIPML.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_pml_updates_magnetic_HORIPML.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_pml_updates_magnetic_MRIPML.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_snapshots.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_source_updates.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cuda_opencl/knl_store_outputs.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/fields_updates_dispersive_template.jinja

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/fields_updates_hsg.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/fields_updates_normal.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/fractals_generate.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -27,7 +27,7 @@ cpdef void generate_fractal2D(
     int nx,
     int ny,
     int nthreads,
-    int b,
+    float D,
     np.float64_t[:] weighting,
     np.float64_t[:] v1,
     np.complex128_t[:, ::1] A,
@@ -38,7 +38,7 @@ cpdef void generate_fractal2D(
     Args:
         nx, ny: int for fractal surface size in cells.
         nthreads: int for number of threads to use
-        b: int for constant related to fractal dimension.
+        D: float for fractal dimension.
         weighting: memoryview for access to weighting vector.
         v1: memoryview for access to positional vector at centre of array,
             scaled by weighting.
@@ -59,7 +59,7 @@ cpdef void generate_fractal2D(
 
                 # Calulate norm of v2 - v1
                 rr = ((v2x - v1[0])**2 + (v2y - v1[1])**2)**(1/2)
-                B = rr**b
+                B = rr**D
                 if B == 0:
                     B = 0.9
 
@@ -71,7 +71,7 @@ cpdef void generate_fractal3D(
     int ny,
     int nz,
     int nthreads,
-    int b,
+    float D,
     np.float64_t[:] weighting,
     np.float64_t[:] v1,
     np.complex128_t[:, :, ::1] A,
@@ -82,7 +82,7 @@ cpdef void generate_fractal3D(
     Args:
         nx, ny, nz: int for fractal volume size in cells.
         nthreads: int for number of threads to use
-        b: int for constant related to fractal dimension.
+        D: float for fractal dimension.
         weighting: memoryview for access to weighting vector.
         v1: memoryview for access to positional vector at centre of array,
             scaled by weighting.
@@ -105,7 +105,7 @@ cpdef void generate_fractal3D(
 
                 # Calulate norm of v2 - v1
                 rr = ((v2x - v1[0])**2 + (v2y - v1[1])**2 + (v2z - v1[2])**2)**(1/2)
-                B = rr**b
+                B = rr**D
                 if B == 0:
                     B = 0.9
 

gprMax/cython/geometry_outputs.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/geometry_primitives.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/pml_build.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/pml_updates_electric_HORIPML.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/pml_updates_electric_MRIPML.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/pml_updates_magnetic_HORIPML.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/pml_updates_magnetic_MRIPML.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/snapshots.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/yee_cell_build.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/yee_cell_setget_rigid.pxd

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/cython/yee_cell_setget_rigid.pyx

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/fields_outputs.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/fractals.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -56,9 +56,7 @@ class FractalSurface:
         self.nz = zf - zs
         self.dtype = np.dtype(np.complex128)
         self.seed = seed
-        self.dimension = dimension
+        self.dimension = dimension # Fractal dimension from: http://dx.doi.org/10.1017/CBO9781139174695
-        # Constant related to fractal dimension from: http://dx.doi.org/10.1017/CBO9781139174695
-        self.b = -(2 * self.dimension - 7) / 2
         self.weighting = np.array([1, 1], dtype=np.float64)
         self.fractalrange = (0, 0)
         self.filldepth = 0
@@ -100,7 +98,7 @@ class FractalSurface:
             surfacedims[0],
             surfacedims[1],
             config.get_model_config().ompthreads,
-            self.b,
+            self.dimension,
             self.weighting,
             v1,
             A,
@@ -159,9 +157,7 @@ class FractalVolume:
         self.averaging = False
         self.dtype = np.dtype(np.complex128)
         self.seed = seed
-        self.dimension = dimension
+        self.dimension = dimension # Fractal dimension from: http://dx.doi.org/10.1017/CBO9781139174695
-        # Constant related to fractal dimension from: http://dx.doi.org/10.1017/CBO9781139174695
-        self.b = -(2 * self.dimension - 7) / 2
         self.weighting = np.array([1, 1, 1], dtype=np.float64)
         self.nbins = 0
         self.fractalsurfaces = []
@@ -207,7 +203,7 @@ class FractalVolume:
             self.ny,
             self.nz,
             config.get_model_config().ompthreads,
-            self.b,
+            self.dimension,
             self.weighting,
             v1,
             A,

gprMax/geometry_outputs.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/gprMax.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/grid.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/hash_cmds_file.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/hash_cmds_geometry.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/hash_cmds_multiuse.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/hash_cmds_singleuse.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/materials.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -278,7 +278,8 @@ class PeplinskiSoil:
         watereri, waterer, watertau, watersig = calculate_water_properties(T, S)
         f = 1.3e9
         w = 2 * np.pi * f
-        erealw = watereri + ((waterer - watereri) / (1 + (w * watertau) ** 2))
+        waterdeltaer = waterer - watereri
+        erealw = watereri + (waterdeltaer / (1 + (w * watertau) ** 2))
 
         a = 0.65  # Experimentally derived constant
         es = (1.01 + 0.44 * self.rs) ** 2 - 0.062  #  Relative permittivity of sand particles
@@ -309,7 +310,7 @@ class PeplinskiSoil:
             er = 1.15 * er - 0.68
 
             # Permittivity at infinite frequency
-            eri = er - (muiter[0] ** (b2 / a) * DispersiveMaterial.waterdeltaer)
+            eri = er - (muiter[0] ** (b2 / a) * waterdeltaer)
 
             # Effective conductivity
             sig = muiter[0] ** (b2 / a) * ((sigf * (self.rs - self.rb)) / (self.rs * muiter[0]))
@@ -324,7 +325,7 @@ class PeplinskiSoil:
             m.er = eri
             m.se = sig
             m.deltaer.append(er - eri)
-            m.tau.append(DispersiveMaterial.watertau)
+            m.tau.append(watertau)
             m.ID = f"|{float(m.er):.4f}+{float(m.se):.4f}+{float(m.mr):.4f}+{float(m.sm):.4f}|"
             G.materials.append(m)
             self.matID.append(m.numID)
@@ -481,7 +482,7 @@ def calculate_water_properties(T=25, S=0):
     """Get extended Debye model properties for water.
 
     Args:
-        T: float for emperature of water (degrees centigrade).
+        T: float for temperature of water (degrees centigrade).
         S: float for salinity of water (part per thousand).
 
     Returns:

gprMax/model_build_run.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/mpi.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Tobias Schruff
 #
 # This file is part of gprMax.

gprMax/pml.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/receivers.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/scene.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/snapshots.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/solvers.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/sources.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/subgrids/grid.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/subgrids/precursor_nodes.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/subgrids/subgrid_hsg.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/subgrids/updates.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/subgrids/user_objects.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/updates.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/user_inputs.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/utilities/host_info.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -301,12 +301,11 @@ def mem_check_host(mem):
         mem: int for memory required (bytes).
     """
     if mem > config.sim_config.hostinfo["ram"]:
-        logger.exception(
+        logger.warning(
-            f"Memory (RAM) required ~{humanize.naturalsize(mem)} exceeds "
+            f"Memory (RAM) required (~{humanize.naturalsize(mem)}) exceeds "
-            f"{humanize.naturalsize(config.sim_config.hostinfo['ram'], True)} "
+            f"({humanize.naturalsize(config.sim_config.hostinfo['ram'], True)}) "
-            "detected!\n"
+            " physical memory detected!\n"
         )
-        raise ValueError
 
 
 def mem_check_device_snaps(total_mem, snaps_mem):
@@ -324,12 +323,11 @@ def mem_check_device_snaps(total_mem, snaps_mem):
         device_mem = config.get_model_config().device["dev"].global_mem_size
 
     if total_mem - snaps_mem > device_mem:
-        logger.exception(
+        logger.warning(
-            f"Memory (RAM) required ~{humanize.naturalsize(total_mem)} exceeds "
+            f"Memory (RAM) required (~{humanize.naturalsize(total_mem)}) exceeds "
-            f"{humanize.naturalsize(device_mem, True)} "
+            f"({humanize.naturalsize(device_mem, True)}) physical memory detected "
-            f"detected on specified {' '.join(config.get_model_config().device['dev'].name.split())} device!\n"
+            f"on specified {' '.join(config.get_model_config().device['dev'].name.split())} device!\n"
         )
-        raise ValueError
 
     # If the required memory without the snapshots will fit on the GPU then
     # transfer and store snaphots on host

gprMax/utilities/logging.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

gprMax/utilities/utilities.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -183,4 +183,4 @@ def fft_power(waveform, dt):
 
 def timer():
     """Time in fractional seconds."""
-    return timer_fn()
+    return timer_fn()

gprMax/waveforms.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

setup.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/analytical_solutions.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/diff_output_files.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/models_pmls/pml_3D_pec_plate/plot_pml_comparison.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/models_pmls/pml_basic/plot_pml_comparison.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/test_experimental.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

testing/test_models.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/DebyeFit/Debye_Fit.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023, Iraklis Giannakis and Sylwia Majchrowska
+# Copyright (C) 2015-2024, Iraklis Giannakis and Sylwia Majchrowska
 #
 # This module is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License.
 # To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.

toolboxes/DebyeFit/optimization.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023, Iraklis Giannakis and Sylwia Majchrowska
+# Copyright (C) 2015-2024, Iraklis Giannakis and Sylwia Majchrowska
 #
 # This module is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License.
 # To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.

toolboxes/GPRAntennaModels/GSSI.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023, Craig Warren
+# Copyright (C) 2015-2024, Craig Warren
 #
 # This module is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License.
 # To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.

toolboxes/GPRAntennaModels/MALA.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023, Craig Warren
+# Copyright (C) 2015-2024, Craig Warren
 #
 # This module is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License.
 # To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/.

toolboxes/Plotting/plot_Ascan.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Plotting/plot_Bscan.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Plotting/plot_antenna_params.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Plotting/plot_source_wave.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Utilities/Paraview/gprMax.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.
@@ -74,7 +74,7 @@ def display_pmls(pmlthick, dx_dy_dz, nx_ny_nz):
 
     pml_names = ["x0", "y0", "z0", "xmax", "ymax", "zmax"]
     pmls = dict.fromkeys(pml_names, None)
-    SetActiveSource(pv_src)
+    SetActiveSource(pv_data)
 
     if pmlthick[0] != 0:
         x0 = Box(
@@ -159,15 +159,13 @@ def display_pmls(pmlthick, dx_dy_dz, nx_ny_nz):
 
 
 # Get whatever source is loaded - should be loaded file (.vt*) or files (.pvd)
-data = GetActiveSource()
+pv_data = GetActiveSource()
 
 # Hide display of root data
-Hide(data)
+Hide(pv_data)
-
 
 # Single .vti or .vtu file
-file = data.FileName
+file = pv_data.FileName[0]
-dirname = os.path.dirname(file[0])
 
 # Read and display data from file, i.e. materials, sources,  receivers, and PMLs
 with open(file, "rb") as f:
@@ -187,12 +185,8 @@ with open(file, "rb") as f:
 ################
 pv_view = GetActiveView()
 pv_view.AxesGrid.Visibility = 1  # Show Data Axes Grid
-pv_data = OpenDataFile(file)
 pv_disp = Show(pv_data, pv_view)
-pv_src = GetActiveSource()
+pv_disp.ColorArrayName = ["CELLS", "Material"]
-Hide(pv_src)
-src_name = os.path.split(file)
-RenameSource(src_name[1])
 
 # Discretisation
 dl = c["dx_dy_dz"]
@@ -202,7 +196,7 @@ nl = c["nx_ny_nz"]
 # Materials
 try:
     for i, mat in enumerate(c["Materials"]):
-        threshold = threshold_filt(pv_src, i, i, ["CELLS", "Material"])
+        threshold = threshold_filt(pv_data, i, i, ["CELLS", "Material"])
         RenameSource(mat, threshold)
 
         # Show data in view, except for free_space

toolboxes/Utilities/convert_png2h5.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Utilities/get_host_spec.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.

toolboxes/Utilities/outputfiles_merge.py

@@ -1,4 +1,4 @@
-# Copyright (C) 2015-2023: The University of Edinburgh, United Kingdom
+# Copyright (C) 2015-2024: The University of Edinburgh, United Kingdom
 #                 Authors: Craig Warren, Antonis Giannopoulos, and John Hartley
 #
 # This file is part of gprMax.