Update to dispersion analysis for case where there is no waveform in a simulation.

这个提交包含在:
Craig Warren
2017-02-28 17:26:23 +00:00
父节点 51306923f2
当前提交 a22b8c4f1d
共有 2 个文件被更改,包括 45 次插入42 次删除

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@@ -165,51 +165,54 @@ def dispersion_analysis(G):
"""
# Physical phase velocity error (percentage); grid sampling density; material with maximum permittivity; maximum significant frequency
results = {'deltavp': False, 'N': False, 'material': False, 'maxfreq': []}
results = {'deltavp': False, 'N': False, 'waveform': True, 'material': False, 'maxfreq': []}
# Find maximum significant frequency
for waveform in G.waveforms:
if G.waveforms:
for waveform in G.waveforms:
if waveform.type == 'sine' or waveform.type == 'contsine':
results['maxfreq'].append(4 * waveform.freq)
if waveform.type == 'sine' or waveform.type == 'contsine':
results['maxfreq'].append(4 * waveform.freq)
elif waveform.type == 'impulse':
pass
else:
# User-defined waveform
if waveform.type == 'user':
waveformvalues = waveform.uservalues
# Built-in waveform
else:
time = np.linspace(0, 1, G.iterations)
time *= (G.iterations * G.dt)
waveformvalues = np.zeros(len(time))
timeiter = np.nditer(time, flags=['c_index'])
while not timeiter.finished:
waveformvalues[timeiter.index] = waveform.calculate_value(timeiter[0], G.dt)
timeiter.iternext()
# Ensure source waveform is not being overly truncated before attempting any FFT
if np.abs(waveformvalues[-1]) < np.abs(np.amax(waveformvalues)) / 100:
# Calculate magnitude of frequency spectra of waveform
power = 10 * np.log10(np.abs(np.fft.fft(waveformvalues))**2)
freqs = np.fft.fftfreq(power.size, d=G.dt)
# Shift powers so that frequency with maximum power is at zero decibels
power -= np.amax(power)
# Get frequency for max power
freqmaxpower = np.where(np.isclose(power[1::], np.amax(power[1::])))[0][0]
# Set maximum frequency to a threshold drop from maximum power, ignoring DC value
freq = np.where((np.amax(power[freqmaxpower::]) - power[freqmaxpower::]) > G.highestfreqthres)[0][0] + 1
results['maxfreq'].append(freqs[freq])
elif waveform.type == 'impulse':
pass
else:
results['waveformID'] = waveform.ID
# User-defined waveform
if waveform.type == 'user':
waveformvalues = waveform.uservalues
# Built-in waveform
else:
time = np.linspace(0, 1, G.iterations)
time *= (G.iterations * G.dt)
waveformvalues = np.zeros(len(time))
timeiter = np.nditer(time, flags=['c_index'])
while not timeiter.finished:
waveformvalues[timeiter.index] = waveform.calculate_value(timeiter[0], G.dt)
timeiter.iternext()
# Ensure source waveform is not being overly truncated before attempting any FFT
if np.abs(waveformvalues[-1]) < np.abs(np.amax(waveformvalues)) / 100:
# Calculate magnitude of frequency spectra of waveform
power = 10 * np.log10(np.abs(np.fft.fft(waveformvalues))**2)
freqs = np.fft.fftfreq(power.size, d=G.dt)
# Shift powers so that frequency with maximum power is at zero decibels
power -= np.amax(power)
# Get frequency for max power
freqmaxpower = np.where(np.isclose(power[1::], np.amax(power[1::])))[0][0]
# Set maximum frequency to a threshold drop from maximum power, ignoring DC value
freq = np.where((np.amax(power[freqmaxpower::]) - power[freqmaxpower::]) > G.highestfreqthres)[0][0] + 1
results['maxfreq'].append(freqs[freq])
# If waveform is truncated don't do any further analysis
else:
results['waveform'] = False
else:
results['waveform'] = False
if results['maxfreq']:
results['maxfreq'] = max(results['maxfreq'])

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@@ -172,8 +172,8 @@ def run_model(args, currentmodelrun, numbermodelruns, inputfile, usernamespace):
# Check to see if numerical dispersion might be a problem
results = dispersion_analysis(G)
if 'waveformID' in results:
print(Fore.RED + "\nWARNING: Numerical dispersion analysis not carried out as duration of waveform '{}' means it does not fit within specified time window and is therefore being truncated.".format(results['waveformID']) + Style.RESET_ALL)
if not results['waveform']:
print(Fore.RED + "\nWARNING: Numerical dispersion analysis not carried out as either no waveform detected or waveform does not fit within specified time window and is therefore being truncated." + Style.RESET_ALL)
elif results['N'] < G.mingridsampling:
raise GeneralError("Non-physical wave propagation: Material '{}' has wavelength sampled by {} cells, less than required minimum for physical wave propagation. Maximum significant frequency estimated as {:g}Hz".format(results['material'].ID, results['N'], results['maxfreq']))
elif results['deltavp'] and np.abs(results['deltavp']) > G.maxnumericaldisp: