# Copyright (C) 2015-2021: The University of Edinburgh # Authors: Craig Warren, Antonis Giannopoulos, and John Hartley # # This file is part of gprMax. # # gprMax is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # gprMax is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with gprMax. If not, see . import mmap import os from xml.etree import ElementTree as ET import json def display_pmls_new(pmlthick, dx_dy_dz, nx_ny_nz): """Display PMLs as box sources using PML thickness values. Only suitable for gprMax > v.4 Args: pmlthick (tuple): PML thickness values for each slab (cells) dx_dy_dz (tuple): Spatial resolution (m) nx_ny_dz (tuple): Domain size (cells) """ pml_names = ['x0', 'y0', 'z0', 'xmax', 'ymax', 'zmax'] pmls = dict.fromkeys(pml_names, None) if pmlthick[0] != 0: x0 = Box(Center=[pmlthick[0] * dx_dy_dz[0] / 2, nx_ny_nz[1] * dx_dy_dz[1] / 2, nx_ny_nz[2] * dx_dy_dz[2] / 2], XLength=pmlthick[0] * dx_dy_dz[0], YLength=nx_ny_nz[1] * dx_dy_dz[1], ZLength=nx_ny_nz[2] * dx_dy_dz[2]) pmls['x0'] = x0 if pmlthick[3] != 0: xmax = Box(Center=[dx_dy_dz[0] * (nx_ny_nz[0] - pmlthick[3] / 2), nx_ny_nz[1] * dx_dy_dz[1] / 2, nx_ny_nz[2] * dx_dy_dz[2] / 2], XLength=pmlthick[3] * dx_dy_dz[0], YLength=nx_ny_nz[1] * dx_dy_dz[1], ZLength=nx_ny_nz[2] * dx_dy_dz[2]) pmls['xmax'] = xmax if pmlthick[1] != 0: y0 = Box(Center=[nx_ny_nz[0] * dx_dy_dz[0] / 2, pmlthick[1] * dx_dy_dz[1] / 2, nx_ny_nz[2] * dx_dy_dz[2] / 2], XLength=nx_ny_nz[0] * dx_dy_dz[0], YLength=pmlthick[1] * dx_dy_dz[1], ZLength=nx_ny_nz[2] * dx_dy_dz[2]) pmls['y0'] = y0 if pmlthick[4] != 0: ymax = Box(Center=[nx_ny_nz[0] * dx_dy_dz[0] / 2, dx_dy_dz[1] * (nx_ny_nz[1] - pmlthick[4] / 2), nx_ny_nz[2] * dx_dy_dz[2] / 2], XLength=nx_ny_nz[0] * dx_dy_dz[0], YLength=pmlthick[4] * dx_dy_dz[1], ZLength=nx_ny_nz[2] * dx_dy_dz[2]) pmls['ymax'] = ymax if pmlthick[2] != 0: z0 = Box(Center=[nx_ny_nz[0] * dx_dy_dz[0] / 2, nx_ny_nz[1] * dx_dy_dz[1] / 2, pmlthick[2] * dx_dy_dz[2] / 2], XLength=nx_ny_nz[0] * dx_dy_dz[0], YLength=nx_ny_nz[1] * dx_dy_dz[1], ZLength=pmlthick[2] * dx_dy_dz[2]) pmls['z0'] = z0 if pmlthick[5] != 0: zmax = Box(Center=[nx_ny_nz[0] * dx_dy_dz[0] / 2, nx_ny_nz[1] * dx_dy_dz[1] / 2, dx_dy_dz[2] * (nx_ny_nz[2] - pmlthick[5] / 2)], XLength=nx_ny_nz[0] * dx_dy_dz[0], YLength=nx_ny_nz[1] * dx_dy_dz[1], ZLength=pmlthick[5] * dx_dy_dz[2]) pmls['zmax'] = zmax # Name PML sources and set opacity tmp = [] for pml in pmls: if pmls[pml]: RenameSource('PML - ' + pml, pmls[pml]) Hide(pmls[pml], renderview) tmp.append(pmls[pml]) # Create a group of PMLs to switch on/off easily if tmp: pml_gp = AppendDatasets(Input=tmp) RenameSource('PML - All', pml_gp) pml_view = Show(pml_gp) pml_view.Opacity = 0.5 def load_src_rx(srcs, dl): # Display sources and receivers as Paraview box sources for item in srcs: p = item['position'] n = item['name'] src_rx = Box(Center=[p[0] + dl[0]/2, p[1] + dl[1]/2, p[2] + dl[2]/2], XLength=dl[0], YLength=dl[1], ZLength=dl[2]) RenameSource(n, src_rx) Show(src_rx) def load_materials(ml): # create a threshold filter for each material type for i, m in enumerate(ml): threshold = Threshold(Input=model) threshold.ThresholdRange = [i, i] threshold.Scalars = ['CELLS', 'Material'] RenameSource(m, threshold) # Show data in view, except for free_space if i != 1: thresholddisplay = Show(threshold, renderview) thresholddisplay.ColorArrayName = ['CELLS', 'Material'] threshold.UpdatePipeline() from paraview.simple import * # Get whatever source is loaded (should be model) model = GetActiveSource() # Get active view renderview = GetActiveView() # Show Data Axes Grid renderview.AxesGrid.Visibility = 1 # Hide display of root data Hide(model) # one file only for now fp = model.FileName[0] # materials string ms = None # load json embedded in comment of line 3 with open(fp, 'rb') as f: f.readline() f.readline() # comments c = f.readline().decode() # strip comment tags c = c[5:-5] # model information c = json.loads(c) # discretisation dl = c['dx_dy_dz'] # n voxels nl = c['nx_ny_nz'] # load material filters try: ml = c['Materials'] load_materials(ml) except IndexError: print('No Materials to load') # load sources try: srcs = c['Sources'] load_src_rx(srcs, dl) except IndexError: print('No sources to load}') # load rxs try: rxs = c['Receivers'] load_src_rx(rxs, dl) except IndexError: print('No receivers to load') # load pmls try: pt = c['PMLthickness'] display_pmls_new(pt, dl, nl) except IndexError: print('No PMLs to load') RenderAllViews() # Reset view to fit data renderview.ResetCamera() # Show color bar/color legend # thresholdDisplay.SetScalarBarVisibility(renderview, False)