# Copyright (C) 2015: The University of Edinburgh # Authors: Craig Warren and Antonis Giannopoulos # # This file is part of gprMax. # # gprMax is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # gprMax is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with gprMax. If not, see . import sys, os import h5py import numpy as np import matplotlib as mpl import matplotlib.pyplot as plt """Compare field outputs Usage: cd gprMax python -m tests.test_compare_experimental path_to_model_output path_to_real_output """ modelfile = sys.argv[1] realfile = sys.argv[2] path = '/rxs/rx1/' # Key refers to subplot location fields = {0: 'Ex', 1: 'Ey', 2: 'Ez', 3: 'Hx', 4: 'Hy', 5: 'Hz'} plotorder = list(fields.keys()) # Model results f = h5py.File(modelfile, 'r') floattype = f[path + 'Ex'].dtype model = np.zeros((f.attrs['Iterations'], 6), dtype=floattype) timemodel = np.zeros((f.attrs['Iterations']), dtype=floattype) timemodel = np.arange(0, f.attrs['dt'] * f.attrs['Iterations'], f.attrs['dt']) / 1e-9 for ID, name in fields.items(): model[:,ID] = f[path + str(name)][:] * -1 model[:,ID] = model[:,ID] / np.amax(np.abs(model[:,ID])) f.close() # Select model field of interest and find max modelmax = np.where(np.abs(model[:,1]) == 1)[0][0] # Real results with open(realfile, 'r') as f: real = np.loadtxt(f) real[:,1] = real[:,1] / np.amax(np.abs(real[:,1])) realmax = np.where(np.abs(real[:,1]) == 1)[0][0] difftime = - (timemodel[modelmax] - real[realmax,0]) # Plot modelled and real data fig, ax = plt.subplots(num=modelfile + ' versus ' + realfile, figsize=(20, 10), facecolor='w', edgecolor='w') ax.plot(timemodel + difftime, model[:,1], 'r', lw=2, label='Model') ax.plot(real[:,0], real[:,1], 'r', ls='--', lw=2, label='Experiment') ax.set_xlabel('Time [ns]') ax.set_ylabel('Amplitude') ax.set_xlim([0, timemodel[-1]]) ax.set_ylim([-1, 1]) ax.legend() [label.set_bbox(dict(facecolor='white', edgecolor='None', alpha=0.65 )) for label in ax.get_xticklabels() + ax.get_yticklabels()] ax.grid() # Show/print plots savename = os.path.abspath(os.path.dirname(modelfile)) + os.sep + os.path.splitext(os.path.split(modelfile)[1])[0] + '_vs_' + os.path.splitext(os.path.split(realfile)[1])[0] #fig.savefig(savename + '.pdf', dpi=None, format='pdf', bbox_inches='tight', pad_inches=0.1) plt.show()