1601 次代码提交

作者	SHA1	备注	提交日期
nmannall	e818441730	Move iterations and timewindow to FDTDGrid ... Grids need to know the number of iterations and the timewindow to calculate waveform values. While waveforms are global in an MPI sense, subgrids will calculate their own waveforms based on the dt value of the subgrid.	2024-12-10 11:06:30 +00:00
nmannall	d20fc36d29	Move cmds_multiuse.py to new user_objects folder	2024-12-10 10:39:42 +00:00
nmannall	f9b73406ca	Refactor single use commands	2024-12-09 17:33:52 +00:00
nmannall	0869010fc6	Move cmds_singleuse.py to new user_objects folder	2024-12-09 17:27:59 +00:00
nmannall	b5c6045eaf	Add new abstract classes for UserObjects	2024-12-06 16:14:19 +00:00
nmannall	742c75fa5f	Sort non-compound materials by numID	2024-12-06 14:29:04 +00:00
nmannall	8db2383f38	Sort output materials by ID	2024-12-05 17:52:58 +00:00
nmannall	4f2b6f412d	Add class function to create compound material IDs	2024-12-05 17:46:13 +00:00
nmannall	8b038f09c3	Merge branch '37-hdf5-geometry-views' into 26-mpi-geometry-objects	2024-12-04 15:47:35 +00:00
nmannall	32392aba42	Change FDTDGrid.dl type to np.float64	2024-11-26 16:25:59 +00:00
nmannall	11008f9e97	Replace np.single with np.float32 for consistancy	2024-11-26 16:01:19 +00:00
nmannall	439c4cf487	Correct GeometryView size when step is non zero	2024-11-12 17:23:27 +00:00
nmannall	67d6d63072	Add gprmax metadata to geometry objects	2024-11-11 17:01:59 +00:00
nmannall	d09b209ba3	Fix data type for string datasets	2024-11-11 16:56:06 +00:00
nmannall	237c3bae4a	Split up VTKHDF classes into seperate files	2024-11-08 13:03:09 +00:00
nmannall	24863a1b9f	Create folder to split up VTKHDF functionality	2024-11-08 12:55:23 +00:00
nmannall	b6443f1599	Update GeometeryViewLines to use a VtkUnstructuredGrid	2024-11-08 12:40:49 +00:00
nmannall	b886e8e3ee	Add VtkUnstructuredGrid class	2024-11-08 12:16:43 +00:00
nmannall	ad50e2ff91	Update documentation for VtkHdfFile and VtkImageData	2024-11-08 12:12:19 +00:00
nmannall	d0cc25506a	Add validation to ensure vtkImageData files are 3D	2024-11-01 18:03:40 +00:00
nmannall	3bffeb6450	Change GeometryViewVoxel to use VTKHDF file format	2024-11-01 16:10:11 +00:00
nmannall	e8051bc72d	Use numpy arrays to store geometry view extents	2024-11-01 16:07:17 +00:00
nmannall	2eb54832d7	Create class to write VTKHDF Image Data files	2024-11-01 16:02:27 +00:00
nmannall	3e575d9c4d	Use np.single dtype rather than float	2024-11-01 15:55:36 +00:00
nmannall	35133525a7	Correct array slice boundaries for serial geometry objects	2024-10-14 10:32:11 +01:00
nmannall	272fc5d1ff	Remove extra materials output by serial geometry objects	2024-10-14 10:28:32 +01:00
nmannall	24157076a4	Specify dtype of h5 datasets when they are created	2024-10-11 14:17:29 +01:00
nmannall	4e1ac9f063	Merge branch 'mpi' into 26-mpi-geometry-objects	2024-10-11 13:57:43 +01:00
nmannall	15e8eb0e73	Fix model title not being broadcast to all ranks	2024-10-11 13:56:46 +01:00
nmannall	1572a8e823	Refactor writing a material to file to a seperate method	2024-10-10 17:49:54 +01:00
nmannall	4355586328	Add initial MPIGeometryObject implementation	2024-10-10 17:44:45 +01:00
nmannall	e7f5f6260f	Make comment explaining the extra step clearer	2024-10-10 17:42:58 +01:00
nmannall	e338167c8d	Add helper methods to MPIGrid for updating bounds	2024-10-10 17:41:38 +01:00
nmannall	a2475fdee3	Make the Material class sortable by ID	2024-10-10 17:34:49 +01:00
nmannall	405af94272	Ensure the same four component materials form the same ID.	2024-10-10 17:26:01 +01:00
nmannall	8e40fcaad3	Check for missing colon in input command	2024-10-04 17:27:29 +01:00
nmannall	1ad7ed64da	Replace deprecated warn method with warning	2024-10-04 16:41:55 +01:00
nmannall	9dd0d1b255	Add validation for snapshots to fix out of bounds memory access	2024-09-26 18:13:05 +01:00
nmannall	aef7737299	Change mpi and taskfarm flags to use -- convention	2024-08-16 15:49:20 +01:00
nmannall	93dadd9f1e	Reformat long strings in contexts.py	2024-08-16 15:32:34 +01:00
nmannall	c288e8eb7c	Add docstrings to all MPIGrid and FDTDGrid methods	2024-08-16 14:47:45 +01:00
nmannall	89873a5963	Fix bug when rank only contains the final snapshot step	2024-08-06 13:46:11 +01:00
nmannall	9a4d576284	Add additional Snapshot tests (2D slices of 3D model)	2024-08-06 13:44:37 +01:00
nmannall	d4276e44f9	Add has_neighbour helper method	2024-08-05 15:53:26 +01:00
nmannall	33670b3bd1	Merge branch 'devel' into mpi	2024-08-05 15:31:40 +01:00
Craig Warren	9107179d5a	Fixed bug with start/end/thickness of cylindrical sector	2024-07-24 15:13:56 +01:00
nmannall	bef3b8e6bd	Change pml cython functions to double precision ... Reduces numerical differences between serial and MPI implementation	2024-07-24 10:33:44 +01:00
nmannall	bec547f201	Throw exception if unknown grid type	2024-07-18 17:38:06 +01:00
nmannall	960ced4761	Implement Snapshots for MPI ... Works, except for small errors in the corners of 2D models. Requires further investigation.	2024-07-18 17:33:27 +01:00
nmannall	5c9d59d7d1	Fix wrong grid coord when coordinate at edge of grid ... When the global coordinate was in the far edge of the grid, the returned grid coordinate would be one more than the maximum in at least one dimension resulting in comm.Get_cart_rank failing.	2024-07-18 17:17:16 +01:00