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https://gitee.com/sunhf/gprMax.git
已同步 2025-08-07 15:10:13 +08:00
changes
这个提交包含在：
jasminium
540
setup.py
540
setup.py
@@ -1,270 +1,270 @@
|
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# Copyright (C) 2015-2019: The University of Edinburgh
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# Authors: Craig Warren and Antonis Giannopoulos
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||||
#
|
||||
# This file is part of gprMax.
|
||||
#
|
||||
# gprMax is free software: you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License as published by
|
||||
# the Free Software Foundation, either version 3 of the License, or
|
||||
# (at your option) any later version.
|
||||
#
|
||||
# gprMax is distributed in the hope that it will be useful,
|
||||
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
# GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU General Public License
|
||||
# along with gprMax. If not, see <http://www.gnu.org/licenses/>.
|
||||
|
||||
try:
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||||
from setuptools import setup, Extension
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||||
except ImportError:
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||||
from distutils.core import setup
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||||
from distutils.extension import Extension
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||||
|
||||
try:
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import numpy as np
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except ImportError:
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||||
raise ImportError('gprMax requires the NumPy package.')
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||||
|
||||
import glob
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||||
import os
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||||
import pathlib
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||||
import re
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||||
import shutil
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||||
import sys
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||||
from jinja2 import Environment, PackageLoader, select_autoescape
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||||
|
||||
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||||
def build_dispersive_material_templates():
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||||
"""
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||||
Function to generate Cython .pyx files for dispersive media update.
|
||||
Jinja2 templates are used to render the various dispersive update functions.
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||||
"""
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||||
env = Environment(
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||||
loader=PackageLoader(__name__, 'gprMax/templates'),
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||||
)
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||||
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||||
template = env.get_template('fields_updates_dispersive_template')
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||||
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# Render dispersive template for different types
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r = template.render(
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functions=[
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||||
# templates for Double precision and dispersive materials with
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# real susceptibility functions
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||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_double_real',
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||||
'name_b': 'update_electric_dispersive_multipole_B_double_real',
|
||||
'name_a_1': 'update_electric_dispersive_1pole_A_double_real',
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'name_b_1': 'update_electric_dispersive_1pole_B_double_real',
|
||||
'field_type': 'double',
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'dispersive_type': 'double'
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},
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# templates for Float precision and dispersive materials with
|
||||
# real susceptibility functions
|
||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_float_real',
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'name_b': 'update_electric_dispersive_multipole_B_float_real',
|
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'name_a_1': 'update_electric_dispersive_1pole_A_float_real',
|
||||
'name_b_1': 'update_electric_dispersive_1pole_B_float_real',
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'field_type': 'float',
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||||
'dispersive_type': 'float'
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||||
},
|
||||
# templates for Double precision and dispersive materials with
|
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# complex susceptibility functions
|
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{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_double_complex',
|
||||
'name_b': 'update_electric_dispersive_multipole_B_double_complex',
|
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'name_a_1': 'update_electric_dispersive_1pole_A_double_complex',
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'name_b_1': 'update_electric_dispersive_1pole_B_double_complex',
|
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'field_type': 'double',
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'dispersive_type': 'double complex',
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# c function to take real part of complex double type
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'real_part': 'creal'
|
||||
},
|
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# templates for Float precision and dispersive materials with
|
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# complex susceptibility functions
|
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{
|
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'name_a': 'update_electric_dispersive_multipole_A_float_complex',
|
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'name_b': 'update_electric_dispersive_multipole_B_float_complex',
|
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'name_a_1': 'update_electric_dispersive_1pole_A_float_complex',
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'name_b_1': 'update_electric_dispersive_1pole_B_float_complex',
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'field_type': 'float',
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'dispersive_type': 'float complex',
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# c function to take real part of complex double type
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'real_part': 'crealf'
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}]
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)
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with open('gprMax/cython/fields_updates_dispersive.pyx', 'w') as f:
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f.write(r)
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# Generate Cython file for dispersive materials update functions
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build_dispersive_material_templates()
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|
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# Importing _version__.py before building can cause issues.
|
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with open('gprMax/_version.py', 'r') as fd:
|
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version = re.search(r'^__version__\s*=\s*[\'"]([^\'"]*)[\'"]',
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fd.read(), re.MULTILINE).group(1)
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|
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# Parse package name from init file. Importing __init__.py / gprMax will break as gprMax depends on compiled .pyx files.
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with open('gprMax/__init__.py', 'r') as fd:
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packagename = re.search(r'^__name__\s*=\s*[\'"]([^\'"]*)[\'"]',
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fd.read(), re.MULTILINE).group(1)
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|
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packages = [packagename, 'tests', 'tools', 'user_libs']
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|
||||
# Parse long_description from README.rst file.
|
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with open('README.rst','r') as fd:
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||||
long_description = fd.read()
|
||||
|
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# Python version
|
||||
if sys.version_info[:2] < (3, 6):
|
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sys.exit('\nExited: Requires Python 3.6 or newer!\n')
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|
||||
# Process 'build' command line argument
|
||||
if 'build' in sys.argv:
|
||||
print("Running 'build_ext --inplace'")
|
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sys.argv.remove('build')
|
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sys.argv.append('build_ext')
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sys.argv.append('--inplace')
|
||||
|
||||
# Process '--no-cython' command line argument - either Cythonize or just compile the .c files
|
||||
if '--no-cython' in sys.argv:
|
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USE_CYTHON = False
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sys.argv.remove('--no-cython')
|
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else:
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USE_CYTHON = True
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|
||||
# Build a list of all the files that need to be Cythonized looking in gprMax directory
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cythonfiles = []
|
||||
for root, dirs, files in os.walk(os.path.join(os.getcwd(), packagename), topdown=True):
|
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for file in files:
|
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if file.endswith('.pyx'):
|
||||
cythonfiles.append(os.path.relpath(os.path.join(root, file)))
|
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|
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# Process 'cleanall' command line argument - cleanup Cython files
|
||||
if 'cleanall' in sys.argv:
|
||||
USE_CYTHON = False
|
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for file in cythonfiles:
|
||||
filebase = os.path.splitext(file)[0]
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# Remove Cython C files
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if os.path.isfile(filebase + '.c'):
|
||||
try:
|
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os.remove(filebase + '.c')
|
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print('Removed: {}'.format(filebase + '.c'))
|
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except OSError:
|
||||
print('Could not remove: {}'.format(filebase + '.c'))
|
||||
# Remove compiled Cython modules
|
||||
libfile = glob.glob(os.path.join(os.getcwd(), os.path.splitext(file)[0]) + '*.pyd') + glob.glob(os.path.join(os.getcwd(), os.path.splitext(file)[0]) + '*.so')
|
||||
if libfile:
|
||||
libfile = libfile[0]
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||||
try:
|
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os.remove(libfile)
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||||
print('Removed: {}'.format(os.path.abspath(libfile)))
|
||||
except OSError:
|
||||
print('Could not remove: {}'.format(os.path.abspath(libfile)))
|
||||
# Remove build, dist, egg and __pycache__ directories
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shutil.rmtree(os.path.join(os.getcwd(), 'build'), ignore_errors=True)
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shutil.rmtree(os.path.join(os.getcwd(), 'dist'), ignore_errors=True)
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shutil.rmtree(os.path.join(os.getcwd(), 'gprMax.egg-info'), ignore_errors=True)
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||||
for p in pathlib.Path(os.getcwd()).rglob('__pycache__'):
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||||
shutil.rmtree(p, ignore_errors=True)
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print('Removed: {}'.format(p))
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||||
# Now do a normal clean
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sys.argv[1] = 'clean' # this is what distutils understands
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|
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# Set compiler options
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# Windows
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if sys.platform == 'win32':
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||||
compile_args = ['/O2', '/openmp', '/w'] # No static linking as no static version of OpenMP library; /w disables warnings
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linker_args = []
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extra_objects = []
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# macOS - needs gcc (usually via HomeBrew) because the default compiler LLVM (clang) does not support OpenMP
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# - with gcc -fopenmp option implies -pthread
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elif sys.platform == 'darwin':
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gccpath = glob.glob('/usr/local/bin/gcc-[4-9]*')
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if gccpath:
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||||
# Use newest gcc found
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os.environ['CC'] = gccpath[-1].split(os.sep)[-1]
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rpath = '/usr/local/opt/gcc/lib/gcc/' + gccpath[-1].split(os.sep)[-1][-1] + '/'
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else:
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raise('Cannot find gcc 4-9 in /usr/local/bin. gprMax requires gcc to be installed - easily done through the Homebrew package manager (http://brew.sh). Note: gcc with OpenMP support is required.')
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compile_args = ['-O3', '-w', '-fopenmp', '-march=native'] # Sometimes worth testing with '-fstrict-aliasing', '-fno-common'
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linker_args = ['-fopenmp', '-Wl,-rpath,' + rpath]
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extra_objects = []
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# Linux
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elif sys.platform == 'linux':
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||||
compile_args = ['-O3', '-w', '-fopenmp', '-march=native']
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linker_args = ['-fopenmp']
|
||||
extra_objects = []
|
||||
|
||||
# Build a list of all the extensions
|
||||
extensions = []
|
||||
for file in cythonfiles:
|
||||
tmp = os.path.splitext(file)
|
||||
if USE_CYTHON:
|
||||
fileext = tmp[1]
|
||||
else:
|
||||
fileext = '.c'
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extension = Extension(tmp[0].replace(os.sep, '.'),
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[tmp[0] + fileext],
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language='c',
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include_dirs=[np.get_include()],
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extra_compile_args=compile_args,
|
||||
extra_link_args=linker_args,
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||||
extra_objects=extra_objects)
|
||||
extensions.append(extension)
|
||||
|
||||
# Cythonize (build .c files)
|
||||
if USE_CYTHON:
|
||||
from Cython.Build import cythonize
|
||||
extensions = cythonize(extensions,
|
||||
compiler_directives={
|
||||
'boundscheck': False,
|
||||
'wraparound': False,
|
||||
'initializedcheck': False,
|
||||
'embedsignature': True,
|
||||
'language_level': 3
|
||||
},
|
||||
annotate=False)
|
||||
|
||||
# SetupTools Required to make package
|
||||
import setuptools
|
||||
|
||||
setup(name=packagename,
|
||||
version=version,
|
||||
author='Craig Warren and Antonis Giannopoulos',
|
||||
url='http://www.gprmax.com',
|
||||
description='Electromagnetic Modelling Software based on the Finite-Difference Time-Domain (FDTD) method',
|
||||
long_description=long_description,
|
||||
long_description_content_type="text/x-rst",
|
||||
license='GPLv3+',
|
||||
classifiers=[
|
||||
'Environment :: Console',
|
||||
'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
|
||||
'Operating System :: MacOS',
|
||||
'Operating System :: Microsoft :: Windows',
|
||||
'Operating System :: POSIX :: Linux',
|
||||
'Programming Language :: Cython',
|
||||
'Programming Language :: Python :: 3',
|
||||
'Topic :: Scientific/Engineering'
|
||||
],
|
||||
#requirements
|
||||
python_requires=">3.6",
|
||||
install_requires=[
|
||||
"colorama",
|
||||
"cython",
|
||||
"h5py",
|
||||
"jupyter",
|
||||
"matplotlib",
|
||||
"numpy",
|
||||
"psutil",
|
||||
"scipy",
|
||||
"terminaltables",
|
||||
"tqdm",
|
||||
],
|
||||
ext_modules=extensions,
|
||||
packages=packages,
|
||||
include_package_data=True,
|
||||
include_dirs=[np.get_include()])
|
||||
# Copyright (C) 2015-2019: The University of Edinburgh
|
||||
# Authors: Craig Warren and Antonis Giannopoulos
|
||||
#
|
||||
# This file is part of gprMax.
|
||||
#
|
||||
# gprMax is free software: you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License as published by
|
||||
# the Free Software Foundation, either version 3 of the License, or
|
||||
# (at your option) any later version.
|
||||
#
|
||||
# gprMax is distributed in the hope that it will be useful,
|
||||
# but WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||||
# GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU General Public License
|
||||
# along with gprMax. If not, see <http://www.gnu.org/licenses/>.
|
||||
|
||||
try:
|
||||
from setuptools import setup, Extension
|
||||
except ImportError:
|
||||
from distutils.core import setup
|
||||
from distutils.extension import Extension
|
||||
|
||||
try:
|
||||
import numpy as np
|
||||
except ImportError:
|
||||
raise ImportError('gprMax requires the NumPy package.')
|
||||
|
||||
import glob
|
||||
import os
|
||||
import pathlib
|
||||
import re
|
||||
import shutil
|
||||
import sys
|
||||
from jinja2 import Environment, PackageLoader, select_autoescape
|
||||
|
||||
|
||||
def build_dispersive_material_templates():
|
||||
"""
|
||||
Function to generate Cython .pyx files for dispersive media update.
|
||||
Jinja2 templates are used to render the various dispersive update functions.
|
||||
"""
|
||||
env = Environment(
|
||||
loader=PackageLoader(__name__, 'gprMax/templates'),
|
||||
)
|
||||
|
||||
template = env.get_template('fields_updates_dispersive_template')
|
||||
|
||||
# Render dispersive template for different types
|
||||
r = template.render(
|
||||
functions=[
|
||||
# templates for Double precision and dispersive materials with
|
||||
# real susceptibility functions
|
||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_double_real',
|
||||
'name_b': 'update_electric_dispersive_multipole_B_double_real',
|
||||
'name_a_1': 'update_electric_dispersive_1pole_A_double_real',
|
||||
'name_b_1': 'update_electric_dispersive_1pole_B_double_real',
|
||||
'field_type': 'double',
|
||||
'dispersive_type': 'double'
|
||||
},
|
||||
# templates for Float precision and dispersive materials with
|
||||
# real susceptibility functions
|
||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_float_real',
|
||||
'name_b': 'update_electric_dispersive_multipole_B_float_real',
|
||||
'name_a_1': 'update_electric_dispersive_1pole_A_float_real',
|
||||
'name_b_1': 'update_electric_dispersive_1pole_B_float_real',
|
||||
'field_type': 'float',
|
||||
'dispersive_type': 'float'
|
||||
},
|
||||
# templates for Double precision and dispersive materials with
|
||||
# complex susceptibility functions
|
||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_double_complex',
|
||||
'name_b': 'update_electric_dispersive_multipole_B_double_complex',
|
||||
'name_a_1': 'update_electric_dispersive_1pole_A_double_complex',
|
||||
'name_b_1': 'update_electric_dispersive_1pole_B_double_complex',
|
||||
'field_type': 'double',
|
||||
'dispersive_type': 'double complex',
|
||||
# c function to take real part of complex double type
|
||||
'real_part': 'creal'
|
||||
},
|
||||
# templates for Float precision and dispersive materials with
|
||||
# complex susceptibility functions
|
||||
{
|
||||
'name_a': 'update_electric_dispersive_multipole_A_float_complex',
|
||||
'name_b': 'update_electric_dispersive_multipole_B_float_complex',
|
||||
'name_a_1': 'update_electric_dispersive_1pole_A_float_complex',
|
||||
'name_b_1': 'update_electric_dispersive_1pole_B_float_complex',
|
||||
'field_type': 'float',
|
||||
'dispersive_type': 'float complex',
|
||||
# c function to take real part of complex double type
|
||||
'real_part': 'crealf'
|
||||
}]
|
||||
)
|
||||
|
||||
with open('gprMax/cython/fields_updates_dispersive.pyx', 'w') as f:
|
||||
f.write(r)
|
||||
|
||||
# Generate Cython file for dispersive materials update functions
|
||||
build_dispersive_material_templates()
|
||||
|
||||
# Importing _version__.py before building can cause issues.
|
||||
with open('gprMax/_version.py', 'r') as fd:
|
||||
version = re.search(r'^__version__\s*=\s*[\'"]([^\'"]*)[\'"]',
|
||||
fd.read(), re.MULTILINE).group(1)
|
||||
|
||||
# Parse package name from init file. Importing __init__.py / gprMax will break as gprMax depends on compiled .pyx files.
|
||||
with open('gprMax/__init__.py', 'r') as fd:
|
||||
packagename = re.search(r'^__name__\s*=\s*[\'"]([^\'"]*)[\'"]',
|
||||
fd.read(), re.MULTILINE).group(1)
|
||||
|
||||
packages = [packagename, 'tests', 'tools', 'user_libs']
|
||||
|
||||
# Parse long_description from README.rst file.
|
||||
with open('README.rst','r') as fd:
|
||||
long_description = fd.read()
|
||||
|
||||
# Python version
|
||||
if sys.version_info[:2] < (3, 6):
|
||||
sys.exit('\nExited: Requires Python 3.6 or newer!\n')
|
||||
|
||||
# Process 'build' command line argument
|
||||
if 'build' in sys.argv:
|
||||
print("Running 'build_ext --inplace'")
|
||||
sys.argv.remove('build')
|
||||
sys.argv.append('build_ext')
|
||||
sys.argv.append('--inplace')
|
||||
|
||||
# Process '--no-cython' command line argument - either Cythonize or just compile the .c files
|
||||
if '--no-cython' in sys.argv:
|
||||
USE_CYTHON = False
|
||||
sys.argv.remove('--no-cython')
|
||||
else:
|
||||
USE_CYTHON = True
|
||||
|
||||
# Build a list of all the files that need to be Cythonized looking in gprMax directory
|
||||
cythonfiles = []
|
||||
for root, dirs, files in os.walk(os.path.join(os.getcwd(), packagename), topdown=True):
|
||||
for file in files:
|
||||
if file.endswith('.pyx'):
|
||||
cythonfiles.append(os.path.relpath(os.path.join(root, file)))
|
||||
|
||||
# Process 'cleanall' command line argument - cleanup Cython files
|
||||
if 'cleanall' in sys.argv:
|
||||
USE_CYTHON = False
|
||||
for file in cythonfiles:
|
||||
filebase = os.path.splitext(file)[0]
|
||||
# Remove Cython C files
|
||||
if os.path.isfile(filebase + '.c'):
|
||||
try:
|
||||
os.remove(filebase + '.c')
|
||||
print('Removed: {}'.format(filebase + '.c'))
|
||||
except OSError:
|
||||
print('Could not remove: {}'.format(filebase + '.c'))
|
||||
# Remove compiled Cython modules
|
||||
libfile = glob.glob(os.path.join(os.getcwd(), os.path.splitext(file)[0]) + '*.pyd') + glob.glob(os.path.join(os.getcwd(), os.path.splitext(file)[0]) + '*.so')
|
||||
if libfile:
|
||||
libfile = libfile[0]
|
||||
try:
|
||||
os.remove(libfile)
|
||||
print('Removed: {}'.format(os.path.abspath(libfile)))
|
||||
except OSError:
|
||||
print('Could not remove: {}'.format(os.path.abspath(libfile)))
|
||||
# Remove build, dist, egg and __pycache__ directories
|
||||
shutil.rmtree(os.path.join(os.getcwd(), 'build'), ignore_errors=True)
|
||||
shutil.rmtree(os.path.join(os.getcwd(), 'dist'), ignore_errors=True)
|
||||
shutil.rmtree(os.path.join(os.getcwd(), 'gprMax.egg-info'), ignore_errors=True)
|
||||
for p in pathlib.Path(os.getcwd()).rglob('__pycache__'):
|
||||
shutil.rmtree(p, ignore_errors=True)
|
||||
print('Removed: {}'.format(p))
|
||||
# Now do a normal clean
|
||||
sys.argv[1] = 'clean' # this is what distutils understands
|
||||
|
||||
# Set compiler options
|
||||
# Windows
|
||||
if sys.platform == 'win32':
|
||||
compile_args = ['/O2', '/openmp', '/w'] # No static linking as no static version of OpenMP library; /w disables warnings
|
||||
linker_args = []
|
||||
extra_objects = []
|
||||
# macOS - needs gcc (usually via HomeBrew) because the default compiler LLVM (clang) does not support OpenMP
|
||||
# - with gcc -fopenmp option implies -pthread
|
||||
elif sys.platform == 'darwin':
|
||||
gccpath = glob.glob('/usr/local/bin/gcc-[4-9]*')
|
||||
if gccpath:
|
||||
# Use newest gcc found
|
||||
os.environ['CC'] = gccpath[-1].split(os.sep)[-1]
|
||||
rpath = '/usr/local/opt/gcc/lib/gcc/' + gccpath[-1].split(os.sep)[-1][-1] + '/'
|
||||
else:
|
||||
raise('Cannot find gcc 4-9 in /usr/local/bin. gprMax requires gcc to be installed - easily done through the Homebrew package manager (http://brew.sh). Note: gcc with OpenMP support is required.')
|
||||
compile_args = ['-O3', '-w', '-fopenmp', '-march=native'] # Sometimes worth testing with '-fstrict-aliasing', '-fno-common'
|
||||
linker_args = ['-fopenmp', '-Wl,-rpath,' + rpath]
|
||||
extra_objects = []
|
||||
# Linux
|
||||
elif sys.platform == 'linux':
|
||||
compile_args = ['-O3', '-w', '-fopenmp', '-march=native']
|
||||
linker_args = ['-fopenmp']
|
||||
extra_objects = []
|
||||
|
||||
# Build a list of all the extensions
|
||||
extensions = []
|
||||
for file in cythonfiles:
|
||||
tmp = os.path.splitext(file)
|
||||
if USE_CYTHON:
|
||||
fileext = tmp[1]
|
||||
else:
|
||||
fileext = '.c'
|
||||
extension = Extension(tmp[0].replace(os.sep, '.'),
|
||||
[tmp[0] + fileext],
|
||||
language='c',
|
||||
include_dirs=[np.get_include()],
|
||||
extra_compile_args=compile_args,
|
||||
extra_link_args=linker_args,
|
||||
extra_objects=extra_objects)
|
||||
extensions.append(extension)
|
||||
|
||||
# Cythonize (build .c files)
|
||||
if USE_CYTHON:
|
||||
from Cython.Build import cythonize
|
||||
extensions = cythonize(extensions,
|
||||
compiler_directives={
|
||||
'boundscheck': False,
|
||||
'wraparound': False,
|
||||
'initializedcheck': False,
|
||||
'embedsignature': True,
|
||||
'language_level': 3
|
||||
},
|
||||
annotate=False)
|
||||
|
||||
# SetupTools Required to make package
|
||||
import setuptools
|
||||
|
||||
setup(name=packagename,
|
||||
version=version,
|
||||
author='Craig Warren and Antonis Giannopoulos',
|
||||
url='http://www.gprmax.com',
|
||||
description='Electromagnetic Modelling Software based on the Finite-Difference Time-Domain (FDTD) method',
|
||||
long_description=long_description,
|
||||
long_description_content_type="text/x-rst",
|
||||
license='GPLv3+',
|
||||
classifiers=[
|
||||
'Environment :: Console',
|
||||
'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
|
||||
'Operating System :: MacOS',
|
||||
'Operating System :: Microsoft :: Windows',
|
||||
'Operating System :: POSIX :: Linux',
|
||||
'Programming Language :: Cython',
|
||||
'Programming Language :: Python :: 3',
|
||||
'Topic :: Scientific/Engineering'
|
||||
],
|
||||
#requirements
|
||||
python_requires=">3.6",
|
||||
install_requires=[
|
||||
"colorama",
|
||||
"cython",
|
||||
"h5py",
|
||||
"jupyter",
|
||||
"matplotlib",
|
||||
"numpy",
|
||||
"psutil",
|
||||
"scipy",
|
||||
"terminaltables",
|
||||
"tqdm",
|
||||
],
|
||||
ext_modules=extensions,
|
||||
packages=packages,
|
||||
include_package_data=True,
|
||||
include_dirs=[np.get_include()])
|
||||
|
||||
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