From a456c7f6dca56301e3f233baa4bf6573dd0e7e1b Mon Sep 17 00:00:00 2001
From: craig-warren <craig_warren@me.com>
Date: Thu, 7 Jan 2016 22:41:38 +0000
Subject: [PATCH] Initial implementation of s11 parameter calculation and
 plotting.

---
 tools/plot_s11.py | 102 ++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 102 insertions(+)
 create mode 100644 tools/plot_s11.py

diff --git a/tools/plot_s11.py b/tools/plot_s11.py
new file mode 100644
index 00000000..020745fb
--- /dev/null
+++ b/tools/plot_s11.py
@@ -0,0 +1,102 @@
+# Copyright (C) 2015: The University of Edinburgh
+#            Authors: Craig Warren and Antonis Giannopoulos
+#
+# This file is part of gprMax.
+#
+# gprMax is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# gprMax is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with gprMax.  If not, see <http://www.gnu.org/licenses/>.
+
+import argparse
+import h5py
+import numpy as np
+np.seterr(divide='ignore', invalid='ignore')
+import matplotlib.pyplot as plt
+
+from gprMax.exceptions import CmdInputError
+
+"""Plots the s11 scattering parameter (input port voltage reflection coefficient) from an output file containing a transmission line source."""
+
+# Parse command line arguments
+parser = argparse.ArgumentParser(description='Plots the s11 scattering parameter (input port voltage reflection coefficient) from an output file containing a transmission line source.', usage='cd gprMax; python -m tools.plot_s11 outputfile')
+parser.add_argument('outputfile', help='name of output file including path')
+args = parser.parse_args()
+
+# Open output file and read some attributes
+file = args.outputfile
+f = h5py.File(file, 'r')
+dt = f.attrs['dt']
+iterations = f.attrs['Iterations']
+time = np.arange(0, dt * iterations, dt)
+time = time / 1e-9
+
+path = '/tls/tl1/'
+Vinc = f[path + 'Vinc'][:]
+Vscat = f[path + 'Vscat'][:]
+Vtotal = f[path +'Vtotal'][:]
+
+# Calculate magnitude of frequency spectra
+Vincp = np.abs(np.fft.fft(Vinc))**2
+freqs = np.fft.fftfreq(Vincp.size, d=dt)
+Vscatp = np.abs(np.fft.fft(Vscat))**2
+s11 = np.abs(Vscatp / Vincp)
+
+# Convert to decibels
+Vincp = 10 * np.log10(Vincp)
+Vscatp = 10 * np.log10(Vscatp)
+s11 = 10 * np.log10(s11)
+
+# Set plotting range to a frequency
+pltrange = np.where(freqs > 2e9)[0][0]
+pltrange = np.s_[1:pltrange]
+
+# Plot incident voltage
+fig, ((ax1, ax2), (ax3, ax4), (ax5, ax6)) = plt.subplots(nrows=3, ncols=2, num='Incident and scattered voltages', figsize=(20, 10), facecolor='w', edgecolor='w')
+ax1.plot(time, Vinc, 'r', lw=2, label='Vinc')
+ax1.set_xlabel('Time [ns]')
+ax1.set_ylabel('Incident (field) voltage [V]')
+ax1.set_xlim([0, np.amax(time)])
+ax1.grid()
+
+# Plot frequency spectra of incident voltage
+markerline, stemlines, baseline = ax2.stem(freqs[pltrange]/1e9, Vincp[pltrange], '-.')
+plt.setp(stemlines, 'color', 'r')
+plt.setp(markerline, 'markerfacecolor', 'r', 'markeredgecolor', 'r')
+ax2.set_xlabel('Frequency [GHz]')
+ax2.set_ylabel('Power [dB]')
+ax2.grid()
+
+# Plot scattered voltage
+ax3.plot(time, Vscat, 'r', lw=2, label='Vscat')
+ax3.set_xlabel('Time [ns]')
+ax3.set_ylabel('Scattered (field) voltage [V]')
+ax3.set_xlim([0, np.amax(time)])
+ax3.grid()
+
+# Plot frequency spectra of scattered voltage
+markerline, stemlines, baseline = ax4.stem(freqs[pltrange]/1e9, Vscatp[pltrange], '-.')
+plt.setp(stemlines, 'color', 'r')
+plt.setp(markerline, 'markerfacecolor', 'r', 'markeredgecolor', 'r')
+ax4.set_xlabel('Frequency [GHz]')
+ax4.set_ylabel('Power [dB]')
+ax4.grid()
+
+# Plot frequency spectra of s11
+markerline, stemlines, baseline = ax6.stem(freqs[pltrange]/1e9, s11[pltrange], '-.')
+plt.setp(stemlines, 'color', 'r')
+plt.setp(markerline, 'markerfacecolor', 'r', 'markeredgecolor', 'r')
+ax6.set_xlabel('Frequency [GHz]')
+ax6.set_ylabel('Power [dB]')
+ax6.grid()
+
+plt.show()
+f.close()
\ No newline at end of file