Update reading geometry objects for parallel build

reframe_tests/tests/src/geometry_object_tests/geometry_object_move.in

@@ -8,5 +8,5 @@
 
 #rx: 0.08 0.08 0.08
 
-#geometry_objects_read: 0.05 0.05 0.05 partial_volume_read.h5 partial_volume_read_materials.txt
+#geometry_objects_read: 0.03 0.03 0.03 full_volume_read.h5 full_volume_read_materials.txt
 #geometry_objects_write: 0.05 0.05 0.05 0.09 0.09 0.09 partial_volume

reframe_tests/tests/src/geometry_object_tests/geometry_object_read_write.in

@@ -0,0 +1,13 @@
+#title: Hertzian dipole in free-space
+#domain: 0.100 0.100 0.100
+#dx_dy_dz: 0.001 0.001 0.001
+#time_window: 3e-9
+
+#waveform: gaussiandot 1 1e9 myWave
+#hertzian_dipole: z 0.050 0.050 0.050 myWave
+
+#rx: 0.08 0.08 0.08
+
+#geometry_objects_read: 0 0 0 full_volume_read.h5 full_volume_read_materials.txt
+#geometry_objects_write: 0.02 0.02 0.02 0.06 0.06 0.06 partial_volume
+#geometry_objects_write:  0 0 0 0.1 0.1 0.1 full_volume

reframe_tests/tests/standard_tests.py

@@ -1,3 +1,7 @@
+from pathlib import Path
+
+from reframe.core.builtins import run_before
+
 from reframe_tests.tests.base_tests import GprMaxBaseTest
 from reframe_tests.tests.mixins import (
     GeometryObjectsReadMixin,
@@ -7,6 +11,7 @@ from reframe_tests.tests.mixins import (
     ReceiverMixin,
     SnapshotMixin,
 )
+from reframe_tests.tests.regression_checks import GeometryObjectMaterialsRegressionCheck
 
 
 class GprMaxRegressionTest(ReceiverMixin, GprMaxBaseTest):
@@ -32,7 +37,23 @@ class GprMaxGeometryObjectsReadTest(GeometryObjectsReadMixin, GprMaxBaseTest):
 class GprMaxGeometryObjectsReadWriteTest(
     GeometryObjectsReadMixin, GeometryObjectsWriteMixin, GprMaxBaseTest
 ):
-    pass
+    @run_before("sanity")
+    def update_material_files(self):
+        checks = [
+            check
+            for check in self.regression_checks
+            if isinstance(check, GeometryObjectMaterialsRegressionCheck)
+        ]
+        for check in checks:
+            for geometry_object in self.geometry_objects_read.values():
+                material_file = Path(self.stagedir, check.output_file)
+                with open(material_file, "r") as f:
+                    lines = f.readlines()
+
+                with open(material_file, "w") as f:
+                    for line in lines:
+                        new_line = line.replace(f"{{{geometry_object}_materials}}", "")
+                        f.write(new_line)
 
 
 class GprMaxGeometryTest(GeometryObjectsWriteMixin, ReceiverMixin, GprMaxBaseTest):

reframe_tests/tests/test_geometry_objects.py

@@ -30,7 +30,6 @@ class TestGeometryObjectReadFullVolume(ReceiverMixin, GprMaxGeometryObjectsReadT
     sourcesdir = "src/geometry_object_tests"
     model = parameter(["geometry_object_read_full_volume"])
     geometry_objects_read = {"full_volume": "full_volume_read"}
-    geometry_objects_write = ["full_volume"]
     test_dependency = TestGeometryObject
 
 
@@ -45,9 +44,11 @@ class TestGeometryObjectReadFullVolumeMPI(MpiMixin, TestGeometryObjectReadFullVo
 class TestGeometryObjectReadWrite(GeometryOnlyMixin, GprMaxGeometryObjectsReadWriteTest):
     tags = {"test", "serial", "geometry only", "geometry object"}
     sourcesdir = "src/geometry_object_tests"
-    model = parameter(["geometry_object_read_write_partial_volume"])
-    geometry_objects_read = {"partial_volume": "partial_volume_read"}
-    geometry_objects_write = ["partial_volume"]
+    model = parameter(["geometry_object_read_write"])
+    geometry_objects_read = {
+        "full_volume": "full_volume_read",
+    }
+    geometry_objects_write = ["partial_volume", "full_volume"]
     test_dependency = TestGeometryObject
 
 
@@ -56,3 +57,24 @@ class TestGeometryObjectReadWriteMPI(MpiMixin, TestGeometryObjectReadWrite):
     tags = {"test", "mpi", "geometry only", "geometry object"}
     mpi_layout = parameter([[2, 2, 2], [4, 4, 1]])
     test_dependency = TestGeometryObject
+
+
+# TODO: This test fails in the serial implementation due to the geometry
+# object being positioned such that it overflows the grid
+# @rfm.simple_test
+class TestGeometryObjectMove(GeometryOnlyMixin, GprMaxGeometryObjectsReadWriteTest):
+    tags = {"test", "serial", "geometry only", "geometry object"}
+    sourcesdir = "src/geometry_object_tests"
+    model = parameter(["geometry_object_move"])
+    geometry_objects_read = {
+        "full_volume": "full_volume_read",
+    }
+    geometry_objects_write = ["partial_volume"]
+    test_dependency = TestGeometryObject
+
+
+@rfm.simple_test
+class TestGeometryObjectMoveMPI(MpiMixin, TestGeometryObjectMove):
+    tags = {"test", "mpi", "geometry only", "geometry object"}
+    mpi_layout = parameter([[2, 2, 2], [4, 3, 1]])
+    test_dependency = TestGeometryObject