From 6fc1770156462ec2d39cbf5a24c935d98d7885c5 Mon Sep 17 00:00:00 2001
From: Craig Warren <craig_warren@me.com>
Date: Tue, 9 Aug 2016 11:02:53 +0100
Subject: [PATCH] Added downloadable example HPC scripts.

---
 tools/HPC scripts/gprmax_openmp.sh     | 34 +++++++++++++++++++++++
 tools/HPC scripts/gprmax_openmp_mpi.sh | 37 ++++++++++++++++++++++++++
 2 files changed, 71 insertions(+)
 create mode 100644 tools/HPC scripts/gprmax_openmp.sh
 create mode 100644 tools/HPC scripts/gprmax_openmp_mpi.sh

diff --git a/tools/HPC scripts/gprmax_openmp.sh b/tools/HPC scripts/gprmax_openmp.sh
new file mode 100644
index 00000000..22d93f0f
--- /dev/null
+++ b/tools/HPC scripts/gprmax_openmp.sh	
@@ -0,0 +1,34 @@
+#!/bin/bash
+#####################################################################################
+### Specify bash shell:
+#$ -S /bin/bash
+
+### Change to current working directory:
+#$ -cwd
+
+### Specify runtime (hh:mm:ss):
+#$ -l h_rt=01:00:00
+
+### Email options:
+#$ -m ea -M joe.bloggs@email.com
+
+### Parallel environment ($NSLOTS):
+#$ -pe OpenMP 8
+
+### Job script name:
+#$ -N test_openmp.sh
+#####################################################################################
+
+### Initialise environment module
+. /etc/profile.d/modules.sh
+
+### Load Anaconda environment for gprMax, i.e. Python 3 and required packages
+module load anaconda
+source activate gprMax
+
+### Set number of OpenMP threads
+export OMP_NUM_THREADS=$NSLOTS
+
+### Run gprMax with input file
+cd $HOME/gprMax
+python -m gprMax mymodel.in -n 100
\ No newline at end of file
diff --git a/tools/HPC scripts/gprmax_openmp_mpi.sh b/tools/HPC scripts/gprmax_openmp_mpi.sh
new file mode 100644
index 00000000..3d1e096a
--- /dev/null
+++ b/tools/HPC scripts/gprmax_openmp_mpi.sh	
@@ -0,0 +1,37 @@
+#!/bin/bash
+#####################################################################################
+### Specify bash shell:
+#$ -S /bin/bash
+
+### Change to current working directory:
+#$ -cwd
+
+### Specify runtime (hh:mm:ss):
+#$ -l h_rt=01:00:00
+
+### Email options:
+#$ -m ea -M joe.bloggs@email.com
+
+### Parallel environment ($NSLOTS):
+#$ -pe openmpi_fillup_mark2 800
+
+### Job script name:
+#$ -N test_mpi.sh
+#####################################################################################
+
+### Initialise environment module
+. /etc/profile.d/modules.sh
+
+### Load Anaconda environment for gprMax, i.e. Python 3 and required packages
+module load anaconda
+source activate gprMax
+
+### Load OpenMPI
+module load openmpi-gcc
+
+### Set number of OpenMP threads
+export OMP_NUM_THREADS=8
+
+### Run gprMax with input file
+cd $HOME/gprMax
+mpirun -np $NSLOTS python -m gprMax mymodel.in -n 100 -mpi
\ No newline at end of file