Add guidance for using MPI domain decomposition

toolboxes/Utilities/HPC/gprmax_omp_mpi.sh

@@ -13,10 +13,10 @@
 #$ -R y
 
 ### Parallel environment ($NSLOTS):
-#$ -pe mpi 176
+#$ -pe mpi 128
 
 ### Job script name:
-#$ -N gprmax_omp_mpi_no_spawn.sh
+#$ -N gprmax_omp_mpi.sh
 #####################################################################################
 
 ### Initialise environment module
@@ -34,4 +34,4 @@ export OMP_NUM_THREADS=16
 
 ### Run gprMax with input file
 cd $HOME/gprMax
-mpirun -n 11 python -m gprMax mymodel.in -n 10 -taskfarm
+mpirun -n 8 python -m gprMax mymodel.in --mpi 2 2 2

toolboxes/Utilities/HPC/gprmax_omp_taskfarm.sh

@@ -0,0 +1,37 @@
+#!/bin/sh
+#####################################################################################
+### Change to current working directory:
+#$ -cwd
+
+### Specify runtime (hh:mm:ss):
+#$ -l h_rt=01:00:00
+
+### Email options:
+#$ -m ea -M joe.bloggs@email.com
+
+### Resource reservation:
+#$ -R y
+
+### Parallel environment ($NSLOTS):
+#$ -pe mpi 176
+
+### Job script name:
+#$ -N gprmax_omp_taskfarm.sh
+#####################################################################################
+
+### Initialise environment module
+. /etc/profile.d/modules.sh
+
+### Load and activate Anaconda environment for gprMax, i.e. Python 3 and required packages
+module load anaconda
+source activate gprMax
+
+### Load OpenMPI
+module load openmpi
+
+### Set number of OpenMP threads per MPI task (each gprMax model)
+export OMP_NUM_THREADS=16
+
+### Run gprMax with input file
+cd $HOME/gprMax
+mpirun -n 11 python -m gprMax mymodel.in -n 10 --taskfarm