Updated with ruff formatter

toolboxes/Utilities/convert_png2h5.py

@@ -55,7 +55,9 @@ class Cursor(object):
                 )  # Convert pixel values from float (0-1) to integer (0-255)
                 match = pixel_match(materials, pixel)
                 if match is False:
-                    logger.info(f"x, y: {int(x)} {int(y)} px; RGB: {pixel[:-1]}; material ID: {len(self.materials)}")
+                    logger.info(
+                        f"x, y: {int(x)} {int(y)} px; RGB: {pixel[:-1]}; material ID: {len(self.materials)}"
+                    )
                     materials.append(pixel)
 
 
@@ -85,10 +87,17 @@ if __name__ == "__main__":
     )
     parser.add_argument("imagefile", help="name of image file including path")
     parser.add_argument(
-        "dxdydz", type=float, action="append", nargs=3, help="spatial resolution of model, e.g. dx dy dz"
+        "dxdydz",
+        type=float,
+        action="append",
+        nargs=3,
+        help="spatial resolution of model, e.g. dx dy dz",
     )
     parser.add_argument(
-        "-zcells", default=1, type=int, help="number of cells for domain in z-direction (infinite direction)"
+        "-zcells",
+        default=1,
+        type=int,
+        help="number of cells for domain in z-direction (infinite direction)",
     )
     args = parser.parse_args()
 
@@ -97,7 +106,9 @@ if __name__ == "__main__":
 
     # Store image data to use for creating geometry
     imdata = np.rot90(im, k=3)  # Rotate 90CW
-    imdata = np.floor(imdata * 255).astype(np.int16)  # Convert pixel values from float (0-1) to integer (0-255)
+    imdata = np.floor(imdata * 255).astype(
+        np.int16
+    )  # Convert pixel values from float (0-1) to integer (0-255)
 
     logger.info(f"Reading PNG image file: {os.path.split(args.imagefile)[1]}")
     logger.info(

toolboxes/Utilities/get_host_spec.py

@@ -33,7 +33,11 @@ logging.basicConfig(format="%(message)s", level=logging.INFO)
 
 # Host machine info.
 hostinfo = get_host_info()
-hyperthreadingstr = f", {hostinfo['logicalcores']} cores with Hyper-Threading" if hostinfo["hyperthreading"] else ""
+hyperthreadingstr = (
+    f", {hostinfo['logicalcores']} cores with Hyper-Threading"
+    if hostinfo["hyperthreading"]
+    else ""
+)
 hostname = f"\n=== {hostinfo['hostname']}"
 logging.info(f"{hostname} {'=' * (get_terminal_width() - len(hostname) - 1)}")
 logging.info(f"\n{'Mfr/model:':<12} {hostinfo['machineID']}")
@@ -46,7 +50,8 @@ logging.info(f"{'OS/Version:':<12} {hostinfo['osversion']}")
 
 # OpenMP
 logging.info(
-    "\n\n=== OpenMP capabilities (gprMax will not use Hyper-Threading " + "as there is no performance advantage)\n"
+    "\n\n=== OpenMP capabilities (gprMax will not use Hyper-Threading "
+    + "as there is no performance advantage)\n"
 )
 logging.info(f"{'OpenMP threads: '} {hostinfo['physicalcores']}")
 

toolboxes/Utilities/outputfiles_merge.py

@@ -107,7 +107,9 @@ def merge_files(outputfiles, removefiles=False):
                 availableoutputs = list(fin[path].keys())
                 for output in availableoutputs:
                     grp.create_dataset(
-                        output, (fout.attrs["Iterations"], len(outputfiles)), dtype=fin[path + "/" + output].dtype
+                        output,
+                        (fout.attrs["Iterations"], len(outputfiles)),
+                        dtype=fin[path + "/" + output].dtype,
                     )
 
         # For all receivers
@@ -134,9 +136,14 @@ if __name__ == "__main__":
         + "optionally removes the series of output files.",
         usage="cd gprMax; python -m tools.outputfiles_merge basefilename",
     )
-    parser.add_argument("basefilename", help="base name of output file series including path")
     parser.add_argument(
-        "--remove-files", action="store_true", default=False, help="flag to remove individual output files after merge"
+        "basefilename", help="base name of output file series including path"
+    )
+    parser.add_argument(
+        "--remove-files",
+        action="store_true",
+        default=False,
+        help="flag to remove individual output files after merge",
     )
     args = parser.parse_args()