Cleanup of imports and checking using pylint

tools/HPC_scripts/gprmax_omp_mpi.sh

@@ -16,7 +16,7 @@
 #$ -pe mpi 176
 
 ### Job script name:
-#$ -N gprmax_omp_mpi.sh
+#$ -N gprmax_omp_mpi_no_spawn.sh
 #####################################################################################
 
 ### Initialise environment module
@@ -34,4 +34,4 @@ export OMP_NUM_THREADS=16
 
 ### Run gprMax with input file
 cd $HOME/gprMax
-python -m gprMax mymodel.in -n 10 -mpi 11
+mpirun -n 11 python -m gprMax mymodel.in -n 10 -mpi

tools/HPC_scripts/gprmax_omp_mpi_no_spawn.sh

@@ -1,37 +0,0 @@
-#!/bin/sh
-#####################################################################################
-### Change to current working directory:
-#$ -cwd
-
-### Specify runtime (hh:mm:ss):
-#$ -l h_rt=01:00:00
-
-### Email options:
-#$ -m ea -M joe.bloggs@email.com
-
-### Resource reservation:
-#$ -R y
-
-### Parallel environment ($NSLOTS):
-#$ -pe mpi 176
-
-### Job script name:
-#$ -N gprmax_omp_mpi_no_spawn.sh
-#####################################################################################
-
-### Initialise environment module
-. /etc/profile.d/modules.sh
-
-### Load and activate Anaconda environment for gprMax, i.e. Python 3 and required packages
-module load anaconda
-source activate gprMax
-
-### Load OpenMPI
-module load openmpi
-
-### Set number of OpenMP threads per MPI task (each gprMax model)
-export OMP_NUM_THREADS=16
-
-### Run gprMax with input file
-cd $HOME/gprMax
-mpirun -n 11 python -m gprMax mymodel.in -n 10 --mpi-no-spawn