Install and run pre-commit

tests/.gitignore

@@ -5,4 +5,4 @@ reframe.log
 reframe.out
 reframe_perf.out
 
-configuration/user_config.py
+configuration/user_config.py

tests/job_scripts/archer2_map_single_node.slurm

@@ -21,4 +21,4 @@ mkdir -p profile/archer2/
 
 map -o="profile/archer2/gprMax_${1}d_${SLURM_CPUS_PER_TASK}t_$(date +%F_%H-%M)" --mpi=slurm --mpiargs="--hint=nomultithread --distribution=block:block" --profile python -m gprMax --log-level 25 src/benchmark_model_$1.in
 
-sacct --format=JobID,State,Submit,Start,End,Elapsed,NodeList --units=M -j $SLURM_JOBID
+sacct --format=JobID,State,Submit,Start,End,Elapsed,NodeList --units=M -j $SLURM_JOBID

tests/job_scripts/archer2_tests.slurm

@@ -14,4 +14,4 @@ source ../.venv/bin/activate
 
 reframe -C configuration/archer2_settings.py -c . -r --performance-report
 
-sacct --format=JobID,State,Submit,Start,End,Elapsed,NodeList --units=M -j $SLURM_JOBID
+sacct --format=JobID,State,Submit,Start,End,Elapsed,NodeList --units=M -j $SLURM_JOBID

tests/utilities/data.py

@@ -50,4 +50,4 @@ def calculate_diffs(test_data, ref_data):
         # Replace any NaNs or Infs from zero division
         diffs[:, i][np.invert(np.isfinite(diffs[:, i]))] = 0
 
-    return diffs
+    return diffs

tests/utilities/plotting.py

@@ -1,5 +1,5 @@
-from matplotlib import pyplot as plt
 import numpy as np
+from matplotlib import pyplot as plt
 
 
 def _plot_data(subplots, time, data, label=None, colour="r", line_style="-"):
@@ -46,8 +46,8 @@ def plot_diffs(time, diffs, plot_min=-160):
     """Plots ...
 
     Args:
-        time: 
-        diffs: 
+        time:
+        diffs:
         plot_min: minimum value of difference to plot (dB). Default: -160
 
     Returns:
@@ -82,4 +82,4 @@ def plot_diffs(time, diffs, plot_min=-160):
         ax.set_ylim(plot_min, y_max)
         ax.grid()
 
-    return fig
+    return fig